Detailed information of SNP:



SNP ID: sf0915181971(Gbrowse)

Chromosome: chr09

Position: 15181971
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1416 98.16% 1.84%
All Indica796 96.86% 3.14%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I374 100.00% 0.00%
Indica II212 94.34% 5.66%
Indica Intermediate210 93.81% 6.19%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0915181971 C->A INTERGENIC None