Detailed information of SNP:
SNP ID:
sf0916118203(Gbrowse)
Chromosome: chr09 Position: 16118203 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 87.67% | 12.33% |
All Indica | 799 | 78.35% | 21.65% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 64.80% | 35.20% |
Indica II | 213 | 97.65% | 2.35% |
Indica Intermediate | 211 | 82.94% | 17.06% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0916118203 | G->A | INTERGENIC | None |