Detailed information of SNP:



SNP ID: sf0916118203(Gbrowse)

Chromosome: chr09

Position: 16118203
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 87.67% 12.33%
All Indica799 78.35% 21.65%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 64.80% 35.20%
Indica II213 97.65% 2.35%
Indica Intermediate211 82.94% 17.06%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0916118203 G->A INTERGENIC None