Detailed information of SNP:
|
SNP ID:
sf0918421795(Gbrowse)
Chromosome: chr09 Position: 18421795 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 91.67% | 8.33% |
| All Indica | 799 | 95.12% | 4.88% |
| All Japonica | 496 | 94.96% | 5.04% |
| Aus | 67 | 38.81% | 61.19% |
| Indica I | 375 | 90.13% | 9.87% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 99.05% | 0.95% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 93 | 78.49% | 21.51% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 13 | 61.54% | 38.46% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0918421795 | G->A | INTERGENIC | None |