Detailed information of SNP:
|
SNP ID:
sf0918837703(Gbrowse)
Chromosome: chr09 Position: 18837703 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1330 | 94.74% | 5.26% |
| All Indica | 713 | 91.02% | 8.98% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 341 | 94.13% | 5.87% |
| Indica II | 186 | 86.56% | 13.44% |
| Indica Intermediate | 186 | 89.78% | 10.22% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 97.87% | 2.13% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 11 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0918837703 | A->G | INTERGENIC | None |