Detailed information of SNP:



SNP ID: sf0918935020(Gbrowse)

Chromosome: chr09

Position: 18935020
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 75.11% 24.89%
All Indica799 64.46% 35.54%
All Japonica497 100.00% 0.00%
Aus67 10.45% 89.55%
Indica I375 81.33% 18.67%
Indica II213 31.46% 68.54%
Indica Intermediate211 67.77% 32.23%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate41 80.49% 19.51%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0918935020 C->T INTERGENIC None