Detailed information of SNP:
SNP ID:
sf0918939911(Gbrowse)
Chromosome: chr09 Position: 18939911 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1371 | 98.40% | 1.60% |
All Indica | 798 | 100.00% | 0.00% |
All Japonica | 456 | 95.61% | 4.39% |
Aus | 66 | 98.48% | 1.52% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 210 | 100.00% | 0.00% |
Temperate Japonica | 314 | 100.00% | 0.00% |
Tropical Japonica | 79 | 79.75% | 20.25% |
Japonica Intermediate | 63 | 93.65% | 6.35% |
Group VI/Aromatic | 13 | 100.00% | 0.00% |
Intermediate | 38 | 97.37% | 2.63% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0918939911 | G->A | INTERGENIC | None |