Detailed information of SNP:
|
SNP ID:
sf0919712593(Gbrowse)
Chromosome: chr09 Position: 19712593 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1406 | 97.23% | 2.77% |
| All Indica | 786 | 95.17% | 4.83% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 367 | 97.28% | 2.72% |
| Indica II | 213 | 99.53% | 0.47% |
| Indica Intermediate | 206 | 86.89% | 13.11% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0919712593 | T->G | INTERGENIC | None |