Detailed information of SNP:
|
SNP ID:
sf0920451194(Gbrowse)
Chromosome: chr09 Position: 20451194 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1414 | 96.18% | 3.82% |
| All Indica | 798 | 97.74% | 2.26% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 64 | 48.44% | 51.56% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 212 | 93.87% | 6.13% |
| Indica Intermediate | 211 | 97.63% | 2.37% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 85.71% | 14.29% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0920451194 | G->A | INTERGENIC | None |