Detailed information of SNP:
|
SNP ID:
sf0921022703(Gbrowse)
Chromosome: chr09 Position: 21022703 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1326 | 54.83% | 45.17% |
| All Indica | 740 | 20.54% | 79.46% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 34 | 100.00% | 0.00% |
| Indica I | 354 | 16.10% | 83.90% |
| Indica II | 188 | 16.49% | 83.51% |
| Indica Intermediate | 198 | 32.32% | 67.68% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921022703 | G->A | INTERGENIC | None |