Detailed information of SNP:
|
SNP ID:
sf0921057612(Gbrowse)
Chromosome: chr09 Position: 21057612 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1284 | 94.94% | 5.06% |
| All Indica | 665 | 90.38% | 9.62% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 285 | 86.67% | 13.33% |
| Indica II | 197 | 97.46% | 2.54% |
| Indica Intermediate | 183 | 88.52% | 11.48% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921057612 | G->A | INTERGENIC | None |