Detailed information of SNP:



SNP ID: sf0921096037(Gbrowse)

Chromosome: chr09

Position: 21096037
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1386 95.17% 4.83%
All Indica768 91.54% 8.46%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I351 81.77% 18.23%
Indica II212 100.00% 0.00%
Indica Intermediate205 99.51% 0.49%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate40 97.50% 2.50%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0921096037 C->T INTERGENIC None