Detailed information of SNP:
|
SNP ID:
sf0921124547(Gbrowse)
Chromosome: chr09 Position: 21124547 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1291 | 91.79% | 8.21% |
| All Indica | 679 | 85.13% | 14.87% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 60 | 93.33% | 6.67% |
| Indica I | 297 | 82.49% | 17.51% |
| Indica II | 202 | 93.07% | 6.93% |
| Indica Intermediate | 180 | 80.56% | 19.44% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921124547 | G->T | INTERGENIC | None |