Detailed information of SNP:
|
SNP ID:
sf0921283928(Gbrowse)
Chromosome: chr09 Position: 21283928 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 56.04% | 43.96% |
| All Indica | 795 | 27.67% | 72.33% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 46.27% | 53.73% |
| Indica I | 374 | 17.91% | 82.09% |
| Indica II | 212 | 45.75% | 54.25% |
| Indica Intermediate | 209 | 26.79% | 73.21% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 73.81% | 26.19% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921283928 | G->A | INTERGENIC | None |