Detailed information of SNP:



SNP ID: sf0921372142(Gbrowse)

Chromosome: chr09

Position: 21372142
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 89.63% 10.37%
All Indica797 83.31% 16.69%
All Japonica497 100.00% 0.00%
Aus67 92.54% 7.46%
Indica I374 91.44% 8.56%
Indica II213 63.85% 36.15%
Indica Intermediate210 88.57% 11.43%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 78.57% 21.43%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0921372142 A->G INTERGENIC None