Detailed information of SNP:
|
SNP ID:
sf0921455767(Gbrowse)
Chromosome: chr09 Position: 21455767 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 56.05% | 43.95% |
| All Indica | 796 | 38.44% | 61.56% |
| All Japonica | 494 | 79.96% | 20.04% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 35.56% | 64.44% |
| Indica II | 212 | 47.17% | 52.83% |
| Indica Intermediate | 210 | 34.76% | 65.24% |
| Temperate Japonica | 334 | 85.33% | 14.67% |
| Tropical Japonica | 92 | 52.17% | 47.83% |
| Japonica Intermediate | 68 | 91.18% | 8.82% |
| Group VI/Aromatic | 14 | 35.71% | 64.29% |
| Intermediate | 42 | 52.38% | 47.62% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921455767 | G->A | INTERGENIC | None |