Detailed information of SNP:
|
SNP ID:
sf0921630019(Gbrowse)
Chromosome: chr09 Position: 21630019 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1414 | 55.23% | 44.77% |
| All Indica | 797 | 90.97% | 9.03% |
| All Japonica | 497 | 0.20% | 99.80% |
| Aus | 67 | 55.22% | 44.78% |
| Indica I | 375 | 92.53% | 7.47% |
| Indica II | 211 | 83.41% | 16.59% |
| Indica Intermediate | 211 | 95.73% | 4.27% |
| Temperate Japonica | 335 | 0.30% | 99.70% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 39 | 43.59% | 56.41% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921630019 | A->G | INTERGENIC | None |