Detailed information of SNP:
|
SNP ID:
sf0921765773(Gbrowse)
Chromosome: chr09 Position: 21765773 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1392 | 96.26% | 3.74% |
| All Indica | 774 | 93.93% | 6.07% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 66 | 96.97% | 3.03% |
| Indica I | 361 | 95.84% | 4.16% |
| Indica II | 212 | 90.57% | 9.43% |
| Indica Intermediate | 201 | 94.03% | 5.97% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0921765773 | G->A | INTERGENIC | None |