Detailed information of SNP:



SNP ID: sf0921970452(Gbrowse)

Chromosome: chr09

Position: 21970452
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1413 95.68% 4.32%
All Indica799 99.87% 0.13%
All Japonica492 88.41% 11.59%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 99.53% 0.47%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 86.23% 13.77%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate64 84.38% 15.62%
Group VI/Aromatic14 92.86% 7.14%
Intermediate41 95.12% 4.88%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0921970452 A->G INTERGENIC None