Detailed information of SNP:
|
SNP ID:
sf0922060567(Gbrowse)
Chromosome: chr09 Position: 22060567 |
Major allele:
A
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1418 | 56.35% | 43.65% |
| All Indica | 798 | 92.23% | 7.77% |
| All Japonica | 497 | 0.00% | 100.00% |
| Aus | 67 | 62.69% | 37.31% |
| Indica I | 374 | 94.12% | 5.88% |
| Indica II | 213 | 88.73% | 11.27% |
| Indica Intermediate | 211 | 92.42% | 7.58% |
| Temperate Japonica | 335 | 0.00% | 100.00% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 47.62% | 52.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0922060567 | G->A | INTERGENIC | None |