Detailed information of SNP:
|
SNP ID:
sf0922080988(Gbrowse)
Chromosome: chr09 Position: 22080988 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1414 | 60.33% | 39.67% |
| All Indica | 797 | 98.87% | 1.13% |
| All Japonica | 497 | 0.20% | 99.80% |
| Aus | 65 | 67.69% | 32.31% |
| Indica I | 375 | 98.93% | 1.07% |
| Indica II | 212 | 99.06% | 0.94% |
| Indica Intermediate | 210 | 98.57% | 1.43% |
| Temperate Japonica | 335 | 0.30% | 99.70% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 41 | 46.34% | 53.66% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0922080988 | A->G | INTERGENIC | None |