Detailed information of SNP:
SNP ID:
sf0922187015(Gbrowse)
Chromosome: chr09 Position: 22187015 |
Major allele:
T
Minor allele: A Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of T(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1382 | 77.93% | 22.07% |
All Indica | 764 | 64.66% | 35.34% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 65.67% | 34.33% |
Indica I | 366 | 63.39% | 36.61% |
Indica II | 189 | 73.02% | 26.98% |
Indica Intermediate | 209 | 59.33% | 40.67% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 92.86% | 7.14% |
Intermediate | 40 | 72.50% | 27.50% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0922187015 | T->A | INTERGENIC | None |