Detailed information of SNP:



SNP ID: sf0922300346(Gbrowse)

Chromosome: chr09

Position: 22300346
Major allele: T

Minor allele: G

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of G(minor allele)
All1392 75.43% 24.57%
All Indica795 60.13% 39.87%
All Japonica497 99.40% 0.60%
Aus46 63.04% 36.96%
Indica I372 72.04% 27.96%
Indica II212 50.00% 50.00%
Indica Intermediate211 49.29% 50.71%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate40 90.00% 10.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0922300346 T->G INTERGENIC None