Detailed information of SNP:



SNP ID: sf0922320104(Gbrowse)

Chromosome: chr09

Position: 22320104
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1415 63.25% 36.75%
All Indica795 40.63% 59.37%
All Japonica497 99.40% 0.60%
Aus67 53.73% 46.27%
Indica I375 27.47% 72.53%
Indica II212 54.72% 45.28%
Indica Intermediate208 50.00% 50.00%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 69.05% 30.95%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0922320104 G->A INTERGENIC None