Detailed information of SNP:



SNP ID: sf1000065190(Gbrowse)

Chromosome: chr10

Position: 65190
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1415 97.53% 2.47%
All Indica799 100.00% 0.00%
All Japonica493 93.91% 6.09%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica332 91.57% 8.43%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate67 97.01% 2.99%
Group VI/Aromatic14 64.29% 35.71%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1000065190 G->A INTERGENIC None