Detailed information of SNP:
SNP ID:
sf1000876631(Gbrowse)
Chromosome: chr10 Position: 876631 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1417 | 93.58% | 6.42% |
All Indica | 799 | 99.00% | 1.00% |
All Japonica | 497 | 89.13% | 10.87% |
Aus | 65 | 60.00% | 40.00% |
Indica I | 375 | 98.67% | 1.33% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 98.58% | 1.42% |
Temperate Japonica | 335 | 84.48% | 15.52% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 97.06% | 2.94% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1000876631 | A->G | INTERGENIC | None |