Detailed information of SNP:



SNP ID: sf1002757340(Gbrowse)

Chromosome: chr10

Position: 2757340
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1413 88.18% 11.82%
All Indica796 97.86% 2.14%
All Japonica495 79.39% 20.61%
Aus67 37.31% 62.69%
Indica I375 98.40% 1.60%
Indica II211 99.53% 0.47%
Indica Intermediate210 95.24% 4.76%
Temperate Japonica335 94.63% 5.37%
Tropical Japonica92 23.91% 76.09%
Japonica Intermediate68 79.41% 20.59%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 85.37% 14.63%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1002757340 A->G INTERGENIC None