Detailed information of SNP:
SNP ID:
sf1002796247(Gbrowse)
Chromosome: chr10 Position: 2796247 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1416 | 97.81% | 2.19% |
All Indica | 797 | 96.11% | 3.89% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 374 | 97.33% | 2.67% |
Indica II | 212 | 93.87% | 6.13% |
Indica Intermediate | 211 | 96.21% | 3.79% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1002796247 | G->A | INTERGENIC | None |