Detailed information of SNP:
|
SNP ID:
sf1003082814(Gbrowse)
Chromosome: chr10 Position: 3082814 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1350 | 96.89% | 3.11% |
| All Indica | 732 | 94.40% | 5.60% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 335 | 88.96% | 11.04% |
| Indica II | 200 | 100.00% | 0.00% |
| Indica Intermediate | 197 | 97.97% | 2.03% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1003082814 | G->A | INTERGENIC | None |