Detailed information of SNP:



SNP ID: sf1003718319(Gbrowse)

Chromosome: chr10

Position: 3718319
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 98.38% 1.62%
All Indica799 99.87% 0.13%
All Japonica497 95.77% 4.23%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 95.22% 4.78%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 92.65% 7.35%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1003718319 G->A INTERGENIC None