Detailed information of SNP:



SNP ID: sf1005284902(Gbrowse)

Chromosome: chr10

Position: 5284902
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1416 52.40% 47.60%
All Indica796 30.53% 69.47%
All Japonica497 92.76% 7.24%
Aus67 0.00% 100.00%
Indica I374 25.40% 74.60%
Indica II213 44.13% 55.87%
Indica Intermediate209 25.84% 74.16%
Temperate Japonica335 91.34% 8.66%
Tropical Japonica94 95.74% 4.26%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 71.43% 28.57%
Intermediate42 66.67% 33.33%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1005284902 A->G INTERGENIC None