Detailed information of SNP:



SNP ID: sf1006091824(Gbrowse)

Chromosome: chr10

Position: 6091824
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1414 73.34% 26.66%
All Indica798 99.50% 0.50%
All Japonica494 26.52% 73.48%
Aus67 100.00% 0.00%
Indica I375 99.47% 0.53%
Indica II212 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica332 4.52% 95.48%
Tropical Japonica94 93.62% 6.38%
Japonica Intermediate68 41.18% 58.82%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 75.61% 24.39%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1006091824 G->A INTERGENIC None