Detailed information of SNP:



SNP ID: sf1006279762(Gbrowse)

Chromosome: chr10

Position: 6279762
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 91.12% 8.88%
All Indica799 99.62% 0.38%
All Japonica497 75.65% 24.35%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 99.06% 0.94%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 65.97% 34.03%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 89.71% 10.29%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1006279762 A->G INTERGENIC None