Detailed information of SNP:
|
SNP ID:
sf1006368511(Gbrowse)
Chromosome: chr10 Position: 6368511 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 83.51% | 16.49% |
| All Indica | 799 | 85.61% | 14.39% |
| All Japonica | 497 | 90.95% | 9.05% |
| Aus | 67 | 2.99% | 97.01% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 213 | 74.18% | 25.82% |
| Indica Intermediate | 211 | 81.04% | 18.96% |
| Temperate Japonica | 335 | 97.91% | 2.09% |
| Tropical Japonica | 94 | 75.53% | 24.47% |
| Japonica Intermediate | 68 | 77.94% | 22.06% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 78.57% | 21.43% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1006368511 | G->A | INTERGENIC | None |