Detailed information of SNP:



SNP ID: sf1006732677(Gbrowse)

Chromosome: chr10

Position: 6732677
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1416 70.20% 29.80%
All Indica797 58.85% 41.15%
All Japonica496 83.67% 16.33%
Aus67 100.00% 0.00%
Indica I375 90.40% 9.60%
Indica II212 25.47% 74.53%
Indica Intermediate210 36.19% 63.81%
Temperate Japonica335 96.72% 3.28%
Tropical Japonica93 47.31% 52.69%
Japonica Intermediate68 69.12% 30.88%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 69.05% 30.95%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1006732677 A->G INTERGENIC None