Detailed information of SNP:
|
SNP ID:
sf1008156068(Gbrowse)
Chromosome: chr10 Position: 8156068 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 94.13% | 5.87% |
| All Indica | 799 | 98.50% | 1.50% |
| All Japonica | 493 | 99.59% | 0.41% |
| Aus | 67 | 4.48% | 95.52% |
| Indica I | 375 | 97.33% | 2.67% |
| Indica II | 213 | 99.53% | 0.47% |
| Indica Intermediate | 211 | 99.53% | 0.47% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 90 | 97.78% | 2.22% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 88.10% | 11.90% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1008156068 | G->A | INTERGENIC | None |