Detailed information of SNP:



SNP ID: sf1008403786(Gbrowse)

Chromosome: chr10

Position: 8403786
Major allele: T

Minor allele: A

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of A(minor allele)
All1215 87.00% 13.00%
All Indica603 81.43% 18.57%
All Japonica497 91.55% 8.45%
Aus67 100.00% 0.00%
Indica I350 97.14% 2.86%
Indica II125 50.40% 49.60%
Indica Intermediate128 68.75% 31.25%
Temperate Japonica335 97.91% 2.09%
Tropical Japonica94 77.66% 22.34%
Japonica Intermediate68 79.41% 20.59%
Group VI/Aromatic14 100.00% 0.00%
Intermediate34 88.24% 11.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1008403786 T->A INTERGENIC None