Detailed information of SNP:
|
SNP ID:
sf1008484766(Gbrowse)
Chromosome: chr10 Position: 8484766 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1405 | 70.18% | 29.82% |
| All Indica | 790 | 79.75% | 20.25% |
| All Japonica | 495 | 53.74% | 46.26% |
| Aus | 65 | 75.38% | 24.62% |
| Indica I | 371 | 88.68% | 11.32% |
| Indica II | 211 | 67.77% | 32.23% |
| Indica Intermediate | 208 | 75.96% | 24.04% |
| Temperate Japonica | 334 | 54.79% | 45.21% |
| Tropical Japonica | 94 | 70.21% | 29.79% |
| Japonica Intermediate | 67 | 25.37% | 74.63% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 68.29% | 31.71% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1008484766 | A->G | INTERGENIC | None |