Detailed information of SNP:
|
SNP ID:
sf1008733237(Gbrowse)
Chromosome: chr10 Position: 8733237 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1251 | 97.36% | 2.64% |
| All Indica | 635 | 94.80% | 5.20% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 246 | 87.80% | 12.20% |
| Indica II | 206 | 99.51% | 0.49% |
| Indica Intermediate | 183 | 98.91% | 1.09% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 38 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1008733237 | G->A | INTERGENIC | None |