Detailed information of SNP:
|
SNP ID:
sf1009247091(Gbrowse)
Chromosome: chr10 Position: 9247091 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1392 | 79.60% | 20.40% |
| All Indica | 775 | 65.55% | 34.45% |
| All Japonica | 497 | 97.99% | 2.01% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 362 | 75.41% | 24.59% |
| Indica II | 210 | 51.90% | 48.10% |
| Indica Intermediate | 203 | 62.07% | 37.93% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 91.49% | 8.51% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 82.05% | 17.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1009247091 | G->A | INTERGENIC | None |