Detailed information of SNP:
|
SNP ID:
sf1009247111(Gbrowse)
Chromosome: chr10 Position: 9247111 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1368 | 80.77% | 19.23% |
| All Indica | 752 | 67.29% | 32.71% |
| All Japonica | 496 | 97.98% | 2.02% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 355 | 76.62% | 23.38% |
| Indica II | 205 | 52.20% | 47.80% |
| Indica Intermediate | 192 | 66.15% | 33.85% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 93 | 91.40% | 8.60% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 82.05% | 17.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1009247111 | G->A | INTERGENIC | None |