Detailed information of SNP:
|
SNP ID:
sf1009429124(Gbrowse)
Chromosome: chr10 Position: 9429124 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1384 | 95.09% | 4.91% |
| All Indica | 792 | 99.12% | 0.88% |
| All Japonica | 494 | 97.57% | 2.43% |
| Aus | 47 | 4.26% | 95.74% |
| Indica I | 372 | 99.73% | 0.27% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 207 | 100.00% | 0.00% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 91 | 93.41% | 6.59% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 12 | 91.67% | 8.33% |
| Intermediate | 39 | 92.31% | 7.69% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1009429124 | G->A | INTERGENIC | None |