Detailed information of SNP:
|
SNP ID:
sf1009640732(Gbrowse)
Chromosome: chr10 Position: 9640732 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1387 | 96.18% | 3.82% |
| All Indica | 770 | 93.38% | 6.62% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 66 | 98.48% | 1.52% |
| Indica I | 360 | 94.44% | 5.56% |
| Indica II | 208 | 92.31% | 7.69% |
| Indica Intermediate | 202 | 92.57% | 7.43% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1009640732 | G->A | INTERGENIC | None |