Detailed information of SNP:



SNP ID: sf1010047112(Gbrowse)

Chromosome: chr10

Position: 10047112
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1418 94.64% 5.36%
All Indica799 100.00% 0.00%
All Japonica496 84.68% 15.32%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 78.44% 21.56%
Tropical Japonica94 96.81% 3.19%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1010047112 A->G INTERGENIC None