Detailed information of SNP:
|
SNP ID:
sf1010224927(Gbrowse)
Chromosome: chr10 Position: 10224927 |
Major allele:
C
Minor allele: T Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1369 | 98.47% | 1.53% |
| All Indica | 797 | 100.00% | 0.00% |
| All Japonica | 451 | 95.34% | 4.66% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 100.00% | 0.00% |
| Temperate Japonica | 305 | 95.74% | 4.26% |
| Tropical Japonica | 79 | 91.14% | 8.86% |
| Japonica Intermediate | 67 | 98.51% | 1.49% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1010224927 | C->T | INTERGENIC | None |