Detailed information of SNP:
|
SNP ID:
sf1010367011(Gbrowse)
Chromosome: chr10 Position: 10367011 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1390 | 89.42% | 10.58% |
| All Indica | 782 | 98.72% | 1.28% |
| All Japonica | 487 | 73.51% | 26.49% |
| Aus | 65 | 98.46% | 1.54% |
| Indica I | 363 | 98.62% | 1.38% |
| Indica II | 211 | 98.58% | 1.42% |
| Indica Intermediate | 208 | 99.04% | 0.96% |
| Temperate Japonica | 327 | 68.20% | 31.80% |
| Tropical Japonica | 92 | 95.65% | 4.35% |
| Japonica Intermediate | 68 | 69.12% | 30.88% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1010367011 | G->A | INTERGENIC | None |