Detailed information of SNP:
SNP ID:
sf1010408368(Gbrowse)
Chromosome: chr10 Position: 10408368 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1408 | 97.51% | 2.49% |
All Indica | 788 | 95.56% | 4.44% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 368 | 91.85% | 8.15% |
Indica II | 211 | 100.00% | 0.00% |
Indica Intermediate | 209 | 97.61% | 2.39% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1010408368 | A->G | INTERGENIC | None |