Detailed information of SNP:
SNP ID:
sf1011040096(Gbrowse)
Chromosome: chr10 Position: 11040096 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 71.25% | 28.75% |
All Indica | 799 | 97.37% | 2.63% |
All Japonica | 497 | 24.95% | 75.05% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 95.20% | 4.80% |
Indica II | 213 | 98.59% | 1.41% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 335 | 3.88% | 96.12% |
Tropical Japonica | 94 | 91.49% | 8.51% |
Japonica Intermediate | 68 | 36.76% | 63.24% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 66.67% | 33.33% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1011040096 | A->G | INTERGENIC | None |