Detailed information of SNP:
|
SNP ID:
sf1011051030(Gbrowse)
Chromosome: chr10 Position: 11051030 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 69.56% | 30.44% |
| All Indica | 798 | 94.24% | 5.76% |
| All Japonica | 496 | 24.40% | 75.60% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 91.20% | 8.80% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 210 | 95.71% | 4.29% |
| Temperate Japonica | 334 | 3.29% | 96.71% |
| Tropical Japonica | 94 | 91.49% | 8.51% |
| Japonica Intermediate | 68 | 35.29% | 64.71% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 75.61% | 24.39% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1011051030 | A->G | INTERGENIC | None |