Detailed information of SNP:
|
SNP ID:
sf1011065732(Gbrowse)
Chromosome: chr10 Position: 11065732 |
Major allele:
T
Minor allele: A Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1406 | 96.30% | 3.70% |
| All Indica | 799 | 99.75% | 0.25% |
| All Japonica | 496 | 90.32% | 9.68% |
| Aus | 56 | 98.21% | 1.79% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 335 | 88.66% | 11.34% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 67 | 86.57% | 13.43% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1011065732 | T->A | INTERGENIC | None |