Detailed information of SNP:
|
SNP ID:
sf1011567963(Gbrowse)
Chromosome: chr10 Position: 11567963 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 64.08% | 35.92% |
| All Indica | 798 | 77.94% | 22.06% |
| All Japonica | 496 | 54.03% | 45.97% |
| Aus | 67 | 0.00% | 100.00% |
| Indica I | 374 | 62.30% | 37.70% |
| Indica II | 213 | 94.37% | 5.63% |
| Indica Intermediate | 211 | 89.10% | 10.90% |
| Temperate Japonica | 335 | 75.22% | 24.78% |
| Tropical Japonica | 94 | 4.26% | 95.74% |
| Japonica Intermediate | 67 | 17.91% | 82.09% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 40.48% | 59.52% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1011567963 | G->A | INTERGENIC | None |